Airline: PAL Express
- Antique - Manila
- Bacolod - Cebu City
- Bacolod - Manila
- Basco - Luzon Island
- Basco - Manila
- Bethpage - Cebu City
- Busuanga - Cebu City
- Busuanga - Luzon Island
- Busuanga - Manila
- Busuanga - Puerto Princesa
- Butuan - Cebu City
- Butuan - Manila
- Cagayan De Oro - Cebu City
- Cagayan De Oro - Davao
- Cagayan De Oro - Manila
- Calbayog - Manila
- Catarman - Manila
- Caticlan - Cebu City
- Caticlan - Luzon Island
- Caticlan - Manila
- Cebu City - Bacolod
- Cebu City - Bethpage
- Cebu City - Busuanga
- Cebu City - Butuan
- Cebu City - Cagayan De Oro
- Cebu City - Caticlan
- Cebu City - Cotabato
- Cebu City - Davao
- Cebu City - General Santos City
- Cebu City - Hong Kong
- Cebu City - Iloilo
- Cebu City - Kalibo
- Cebu City - Legaspi
- Cebu City - Luzon Island
- Cebu City - Manila
- Cebu City - Ozamis City
- Cebu City - Pagadian
- Cebu City - Puerto Princesa
- Cebu City - Sayak (Siargao)
- Cebu City - Surigao
- Cebu City - Tacloban
- Cebu City - Zamboanga
- Cotabato - Cebu City
- Cotabato - Manila
- Cotabato - Tawitawi
- Davao - Cagayan De Oro
- Davao - Cebu City
- Davao - Iloilo
- Davao - Luzon Island
- Davao - Manila
- Davao - Tagbilaran
- Davao - Zamboanga
- Dipolog - Manila
- Dubai - Manila
- Dumaguete - Manila
- General Santos City - Cebu City
- General Santos City - Iloilo
- General Santos City - Manila
- Hong Kong - Cebu City
- Hong Kong - Luzon Island
- Iloilo - Cebu City
- Iloilo - Davao
- Iloilo - General Santos City
- Iloilo - Manila
- Jolo - Zamboanga
- Kalibo - Cebu City
- Kalibo - Luzon Island
- Kalibo - Manila
- Kuala Lumpur - Manila
- Laoag - Manila
- Legaspi - Cebu City
- Legaspi - Manila
- Luzon Island - Basco
- Luzon Island - Busuanga
- Luzon Island - Caticlan
- Luzon Island - Cebu City
- Luzon Island - Davao
- Luzon Island - Hong Kong
- Luzon Island - Kalibo
- Luzon Island - Puerto Princesa
- Manila - Antique
- Manila - Bacolod
- Manila - Basco
- Manila - Busuanga
- Manila - Butuan
- Manila - Cagayan De Oro
- Manila - Calbayog
- Manila - Catarman
- Manila - Caticlan
- Manila - Cebu City
- Manila - Cotabato
- Manila - Davao
- Manila - Dipolog
- Manila - Dubai
- Manila - Dumaguete
- Manila - General Santos City
- Manila - Iloilo
- Manila - Kalibo
- Manila - Kuala Lumpur
- Manila - Laoag
- Manila - Legaspi
- Manila - Masbate
- Manila - Naga
- Manila - Ozamis City
- Manila - Pagadian
- Manila - Phnom Penh
- Manila - Puerto Princesa
- Manila - Roxas City
- Manila - San Jose
- Manila - Sayak (Siargao)
- Manila - Singapore
- Manila - Surigao
- Manila - Tacloban
- Manila - Tagbilaran
- Manila - Tuguegarao
- Manila - Zamboanga
- Masbate - Manila
- Naga - Manila
- Ozamis City - Cebu City
- Ozamis City - Manila
- Pagadian - Cebu City
- Pagadian - Manila
- Phnom Penh - Manila
- Puerto Princesa - Busuanga
- Puerto Princesa - Cebu City
- Puerto Princesa - Luzon Island
- Puerto Princesa - Manila
- Roxas City - Manila
- San Jose - Manila
- Sayak (Siargao) - Cebu City
- Sayak (Siargao) - Manila
- Singapore - Manila
- Surigao - Cebu City
- Surigao - Manila
- Tacloban - Cebu City
- Tacloban - Manila
- Tagbilaran - Davao
- Tagbilaran - Manila
- Tawitawi - Cotabato
- Tawitawi - Zamboanga
- Tuguegarao - Manila
- Zamboanga - Cebu City
- Zamboanga - Davao
- Zamboanga - Jolo
- Zamboanga - Manila
- Zamboanga - Tawitawi